CDS

Accession Number TCMCG015C39457
gbkey CDS
Protein Id XP_027071607.1
Location complement(join(10937265..10937272,10937388..10937433,10937627..10937730,10939767..10939881,10939988..10940035,10940493..10940582,10940657..10940731,10941739..10941863,10941866..10941890,10942031..10942115,10942964..10943034,10943434..10943484,10944227..10944643,10944851..10944894,10944897..10944978,10945619..10945732,10947578..10947695,10947941..10947999,10948800..10948870,10948952..10948991))
Gene LOC113696382
GeneID 113696382
Organism Coffea arabica

Protein

Length 597aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027215806.1
Definition LOW QUALITY PROTEIN: DNA-directed RNA polymerase 3, chloroplastic-like [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K00960        [VIEW IN KEGG]
ko:K10908        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0000959        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006390        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034245        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0098798        [VIEW IN EMBL-EBI]
GO:0140053        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACGGGCTGTTTTTATCTAGTTGCATTGGATATAAATGGCAGAACCCCTGTCAAGAGGTACGGAGTTATAGTGTGTGATCCGGTGATCCATTGTGGACTTGATAGAAGTGTTAACCACATGATGGTTCCTTATGTGCCAATGCTGGTGCCACCAAAAAAGTGGAAAGGGTATGATAAAGGTGGTTATTTGTTCTTACCTTCATATTTAATGCGTACTCATGGGTCTAGGCAGCAACAAGATGCTATTAAATGTGCTCCTGTGAAACAAATGCAGAAAGTGTATGAGGCCTTAGATACGTTGGGAAACACCAAATGGAGAGTGAACAGACGAATTCTGAATGTGGTTGAGACTGTTTGGGGAGGAGGTGGCAACATTGCTGGCCTGGTAAACCGCAACGATGTTCATAAACCTGAATTGCACTCTGATGCGGTGGAAGAAATCAAAAAATGGAAATGGAACATGAGGAAAGCAAAAAAAATCACAGAGAGGCACTCACAGCGATGTGACATTGAACTCAAGCTTTCTGTGGCTCATAAAATGAAAGATGAGGATGGTTTTTATTATCCCCACAATCTGGATTTTCGGGGCCGTGCATATCCTATGCATCCACATTTGAATCATCTGAGTTCTGATCTATGTCGAGGGCTCCTGGAGTTTGCAGAAGGACGGCCTTTAGGAAAATCTGGAGTGTATTGGCTTAAGATACATCTAGCAAATCTTTATGGAGGGGTTGTCAAAAAGCTTTCCTATGACCAGCGCCTAGCTTTTGTGGAAAATCACCTGAATGAAGTTTTAGATTCAGCAGATAATCCTCTCAATGGAAATCGCTGGTGGTTAAAGGCTGAGGATCCTTTTCAGTGCTTAGCAGCTTGTATGAACCTATCAGAAGCCTTAAAGAGCTCATCACCACATACTGTCATCTCTCACCTGCCCATCCACCAGGATGGTTCATGCAATGGTCTACAGCACTATGCAGCTTTGGGGAAAGACAGTATGGAAGCTGCTGCAGTCAATTTAATTGCTGGAGATAAACCTGCAGATGTTTATTCTGAAATTGCTGCAAGGGTTCATGATATTATAAGACTAGACAGTGAAAAGGACCCTACAATTGATCCCAATGCTACAATAGCCAAACTCTTAGTTGATCAGGTAGACAGGAAACTGGTGAAGCAGATCATGACATCGGTATATGGTGTCACTTATGTTGGGGCACGTGAACAAATCAAAAGAAGGTTACAGGAGAAGGGTCTGATTACTGATGATAGGTTGCTGTTCAGTGCAGCTTGCTATGGTGCTAAGGTGACAATGGCTGCACTTGGTGAGCTGTTTCAAGCAGCACGTGGTATAATGGTTTGGCTTGGTGACTGTGCCAAGGTGATTGCTTCAGAAAACCAACCTGTGCGCTGGACAACGCCACTGGGTCTCCCAGTTGTGCAACCATACTTTAAATCTCGGCGGCACATTATAAAAACTTCGCTTCAGGTTCTGGCATTGCAGCGTGAGGGTGATTCAGTTGAGGCTAGAAAACAGAGAACTGCTTTTCCTCCAAATTTTGTGCACTCATTGGATAGTACTCACATGATGATGACCGCAATTGCTTGTAGAGATTCTGGATTGCAATTTGCAGGGGTACATGATTCCTTTTGGACGCATGCGTGTGATGTTGACAAGATGAACCAGATACTGAGAGAGAAATTTGTGGAGCTTTATAGCATGCCAATACTTGAAAATCATCTTGTTTTCAGAGTGGAATATTGTGATTCTAAGAATGAAATTGTTGCTTGA
Protein:  
MTGCFYLVALDINGRTPVKRYGVIVCDPVIHCGLDRSVNHMMVPYVPMLVPPKKWKGYDKGGYLFLPSYLMRTHGSRQQQDAIKCAPVKQMQKVYEALDTLGNTKWRVNRRILNVVETVWGGGGNIAGLVNRNDVHKPELHSDAVEEIKKWKWNMRKAKKINXERHSQRCDIELKLSVAHKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGLLEFAEGRPLGKSGVYWLKIHLANLYGGVVKKLSYDQRLAFVENHLNEVLDSADNPLNGNRWWLKAEDPFQCLAACMNLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGKDSMEAAAVNLIAGDKPADVYSEIAARVHDIIRLDSEKDPTIDPNATIAKLLVDQVDRKLVKQTXMTSVYGVTYVGAREQIKRRLQEKGLITDDRLLFSAACYGAKVTMAALGELFQAARGIMVWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKSRRHIIKTSLQVLALQREGDSVEARKQRTAFPPNFVHSLDSTHMMMTAIACRDSGLQFAGVHDSFWTHACDVDKMNQILREKFVELYSMPILENHLVFRVEYCDSKNEIVA